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C2
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First
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Round
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Second
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Round
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Fca RH Locus
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Map Pos.
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R.F.
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GB Acc. Number
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LGD clone #
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Mapping Method
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Hsa Chrom.
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Hsa Homolog
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GB4-RH
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G3-RH
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HsaCytogen.
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Forward Primer
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Reverse Primer
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Forward Primer
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Reverse Primer
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HRMT1L1
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0.0
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0.34
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AW646868
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EST-TEB7
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RH
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21
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HRMT1L1
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257.89-264.01
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21q22.3
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ATGCAGAGTCCCGTCACAT
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CAACCTTGTACGCCTGTGAA
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FCA568
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4.4
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0.34
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see microsatellites
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RH/GL/SCH
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see microsatellites
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see microsatellites
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Fc.122014
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49.8
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0.34
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AW646869
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EST-TEB8
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RH
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21
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Hs.122014
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164.66
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GATGTCTTTTACCCCGTGGA
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AGAACCGATCATCAGCAGTG
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SON
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94.9
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0.30
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S79173
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RH
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21
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SON
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153.13-167.99
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21q22.11-q22.2
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TCAGCTACACCTAGATAGACGTTAA
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AACTTTCTCAGTCAACAAAATAGTG
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FCA346
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109.9
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0.24
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see microsatellites
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RH/GL/SCH
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see microsatellites
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see microsatellites
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FCA638
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127.9
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0.29
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see microsatellites
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RH/GL/SCH
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see microsatellites
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see microsatellites
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FCA543
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166.0
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0.36
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see microsatellites
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RH/GL
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see microsatellites
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see microsatellites
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FCA535
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173.1
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0.38
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see microsatellites
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RH/GL
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see microsatellites
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see microsatellites
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FCA576
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200.3
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0.36
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see microsatellites
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RH/GL
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see microsatellites
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see microsatellites
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Fc.41151
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249.7
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0.45
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AW646870
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EST-TBH9
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RH
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Hs.41151
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AGAAGTGACTTGCCCACGAT
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CTCCACCAACTCTTGCCTGT
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CD80(B7-1)
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305.3
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0.44
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U57755
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RH
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3
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CD80
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418.79-426.79
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5844
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TCTGCAGAACCACTGTATGC
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AAGAGCTAAAGAGGCTACCTCCA
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FCA483
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336.0
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0.52
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see microsatellites
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RH/GL
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see microsatellites
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see microsatellites
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GCN20
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436.9
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0.48
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AW646871
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EST-TEF6
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RH
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3
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GCN20
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687.41-694.05
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CCTGGGTTATGCAGAGGATG
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CCAGGACATGGACTGGTCTC
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FCA424
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499.5
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0.43
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see microsatellites
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RH/GL
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see microsatellites
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see microsatellites
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SLC2A2
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514.7
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0.44
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AZ081267
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RH
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3
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SLC2A2
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635.59
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8269
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3p26.2-q27
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Jiang et al., 1998
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Jiang et al., 1998
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TAGCTGCATTCAGCAACTGG
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CCAGCGAAGAGGAAAAACAC
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BCHE
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532.4
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0.42
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AF053483
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RH
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3
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BCHE
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610.41
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7891
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3q26.1-q26.2
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GTGAGGCCTTGGATGATGTT
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GCATCACTCCCATCCATTCT
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IL12A
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550.6
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0.38
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AF054605
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RH
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3
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IL12A
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588.49
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7629
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3q25-q26.2
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GCTGTTACAGGCCCTGAATG
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ATTGATGGTCACTGCACGAA
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FCA310
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583.2
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0.36
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see microsatellites
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RH/GL
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see microsatellites
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see microsatellites
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CP
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596.8
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0.37
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U82183
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RH
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3
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CP
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542.39
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3q23-q25
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Lyons et al., 1997
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Lyons et al., 1997
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GGACAGTTTTTCCCTGGTGA
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Fc.37443
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625.7
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0.41
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AW646872
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EST-TAD11
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RH
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Hs.37443
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504.43
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CGTATGTATCCAAAGGCAACATT
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TGGTGCTAGTTCCTTGTGAAGA
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PCCB
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641.0
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0.41
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AW646873
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EST-TSB11
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RH
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PCCB
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3q21-q22
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AAGGCACAAATGAAATCTTCC
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AAACCAAGAGCCAGTTACCG
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TF
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656.9
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0.34
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AW646874
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EST-TGE5
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RH
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3
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TF
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473.59
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3q21
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TGGTGCACTGTCTCAAATCA
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GCTGAAACTGGAGCCCTTAC
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RD114-3D
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666.4
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0.37
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unpublished
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RH/SCH
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TTCCTTCTGGTCAACAGCCTT
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AGCCTGGAGCCTGTTTCC
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FCA117
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691.6
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0.42
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see microsatellites
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RH/GL
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see microsatellites
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see microsatellites
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DAZLA
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715.2
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0.33
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AF114697
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RH
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3
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DAZLA
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3p24
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Murphy et al., 1999a
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Murphy et al., 1999a
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RARB
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734.1
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0.36
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AZ081268
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RH
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3
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RARB
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84.88
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3p24.3-24.2
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Lyons et al., 1997
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Lyons et al., 1997
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ATGCGAGCTGTTTGAGGACT
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TGCAAAAAGCCTTCCGAAT
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FCA043
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753.0
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0.31
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see microsatellites
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RH/GL/SCH
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see microsatellites
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see microsatellites
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FCA148
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775.4
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0.28
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see microsatellites
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RH/GL/SCH
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see microsatellites
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see microsatellites
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Fc.4291
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784.7
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0.28
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AW646875
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EST-TBA4
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RH
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3
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Hs.4291
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133.46-135.37
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CCTCCTTGGAGGAACAGCTT
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TGGAGGCTGAAGAGGAGTCT
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GLB1
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799.8
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0.28
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AF029974
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RH/SCH*
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3
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GLB1
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118.06-122.73
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3p21.33
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TTAGCACGGGTGTTTTCTCC
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CCTTTGAAGCTTCCATTTCG
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SOD1
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SCH
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21
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SOD1
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155.67-161.31
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21q22.1
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ETS2
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SCH
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21
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ETS2
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1256-1269
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21q22.3
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GSR*
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SCH*
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8
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GSR
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118.51
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8p21.1
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RDV4
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SCH
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RDV4
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