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C1
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First
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Round
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Second
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Round
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Fca RH Locus
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Map Pos.
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R.F.
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GB Acc. Number
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LGD clone #
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Mapping Method
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Hsa Chrom.
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Human Homolog
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GB4-RH
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G3-RH
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HsaCytogen.
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Forward Primer
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Reverse Primer
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Forward Primer
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Reverse Primer
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ALPL
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0.0
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0.41
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U31569
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RH
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1
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ALPL
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1p36.1-p34
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AACAGCTGCCAGAAAGAGGA
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GCTTTGAGAATTTCGGCAGT
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Fc.25129
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75.9
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0.26
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AW646845
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EST-TBA9
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RH
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1
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Hs.25129
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58.90
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TACGGGTCACTGTGATGGAA
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GTCTGGAGCATGACCCTCTC
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NPPA
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99.5
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0.22
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AZ081264
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RH
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1
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NPPA
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51.32
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1p36
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Lyons et al., 1997
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Lyons et al., 1997
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CTTTCAGTAATGGGTGAGCG
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Mm.22951
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119.8
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0.25
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AW646846
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EST-TGC9
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RH
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AAAGCATTATCATGGAAGCACA
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CCTTTGATCAGCCTCTCCAA
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VAMP3
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143.0
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0.33
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AW646847
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EST-TAE4
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RH
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1
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VAMP3
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23.89
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349
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CCAGCCAAATGCACAGATAC
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GGCCGTGTCTGACTCTGAA
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FGR
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208.6
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0.22
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AZ081265
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RH
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1
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FGR
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94.50
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Lyons et al., 1997
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Lyons et al., 1997
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GGCTGCTTCGGAAACGTGTG
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GTGGCCGCGGTTCGTCAG
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CDW52
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211.1
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0.24
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AW646848
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EST-TCB9
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RH
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1
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CDW52
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88.54-.64
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CTCCAGCTGGGTGGTACTTG
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GGGGTTAGTGCCAGAGATGA
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COL16A1
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235.8
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0.25
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AW646849
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EST-TCA6
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RH
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1
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COL16A1
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96.85-102.45
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1710
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1p35-34
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CAACCCATCACAGAGTCCTG
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GCCCTCCAGGGTATGGTAAG
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Fc.64239
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249.6
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0.26
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AW646850
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EST-TAF8
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RH
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Hs.64239
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104.00
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GCATACGTACAAATATACACACATACA
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CCCCTTCCCTCCTTGTTTTA
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Fc.121747
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266.6
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0.23
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AW646851
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EST-TFA5
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RH
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Hs.121747
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CCCAAGGCAAATGTCTCTTC
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TTGGCCTTTTCATGTTTTGA
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CAP
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290.3
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0.24
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AW646852
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EST-TBE9/HAB4
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RH
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1
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CAP
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125.24
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AGGAAACTGCACCATTCCAA
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AGGCCTCAGGAAATGGGTAG
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KNSL6
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338.8
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0.24
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AW646853
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EST-TBC10
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RH
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1
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KNSL6
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130.12-142.97
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GGCCGTTTCTTGTTGCTTAT
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GGCCGTTTCTTGTTGCTTAT
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Fc.8980
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355.0
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0.23
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AW646854
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EST-TBG12
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RH
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Hs.8980
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TGTGGTGGTCATGGCTCTTA
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AGCCATAGCAGGAAGGGAAG
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FCA247
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400.8
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0.14
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see microsatellites
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RH/GL/SCH
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see microsatellites
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see microsatellites
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PXMP1
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459.8
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0.25
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Human EST
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RH
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1
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PXMP1
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266.24-266.34
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4593
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1p22-p21
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Chen et al., 1999
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Chen et al., 1999
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CD9
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496.9
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0.34
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D30786
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RH
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12
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CD9
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39.88(12)
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312
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12p13
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ATGCTGGGATTGTTCTTTGG
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GGGCAGATGTCGGAGATAAA
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FCA057
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554.3
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0.39
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see microsatellites
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RH/GL
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see microsatellites
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see microsatellites
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GNAT2
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582.0
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0.49
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RH
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1
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GNAT2
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337.29-339.65
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1p13
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CACAAGTTCTTTGCGGCCACTTC
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GTAGCACAGGTCATGTGACTGTAG
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GAGGCAAACACCAGTCATTACCAAG
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Fc.estTFH1
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637.0
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0.54
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AW646855
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EST-TFH1
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RH
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TCTTGGAGGGTTGTGGAGTC
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GATGGCTCCATTGCTGTGTA
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NRAS
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694.8
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0.51
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AW646856
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EST-TAD1
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RH/SCH
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1
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NRAS
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370.04-372.16
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1p13
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CCCAACTTGGATCATAGTGGAT
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GCAGCTCCACGACCTGATAG
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NGFB
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729.0
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0.45
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U82190
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RH
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1
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NGFB
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374.13-387.14
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5385
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1p13
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Lyons et al., 1997
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Lyons et al., 1997
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TCCAAGTCCAGACCCTGAGT
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HSD3B1
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775.3
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0.54
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RH
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1
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HSD3B1
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402.04-417.79
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5573
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1p13.1
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CATCCAGAATGGCCATGAAGAAG
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GTCATCTGAGATGTAGTAGAACTGTC
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CCTGAGGAACAATGGGATCATCC
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FCA290
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804.0
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0.60
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see microsatellites
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RH/GL/SCH
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see microsatellites
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see microsatellites
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PROC
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870.0
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0.57
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D43750
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RH
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2
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PROC
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456.37
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2q13-q21
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CAGCAGAAGCACCTCAGACA
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GCCAGTCACCACTGTCTCCT
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FCA343
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920.2
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0.45
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see microsatellites
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RH/GL
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see microsatellites
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see microsatellites
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FCA480
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996.9
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0.29
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see microsatellites
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RH/GL/SCH
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see microsatellites
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see microsatellites
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CXCR4
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1030.1
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0.34
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U63558
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RH
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2
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CXCR4
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472.78
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6476
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2q21
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TCTGTGGCAGACCTCCTCTT
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TTTCAGCCAACAGCTTCCTT
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FCA293
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1058.7
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0.36
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see microsatellites
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RH/GL
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see microsatellites
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see microsatellites
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FCA279
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1114.3
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0.36
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see microsatellites
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RH/GL
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see microsatellites
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see microsatellites
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Fc.5324
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1168.5
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0.28
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AW646857
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EST-TDF7
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RH
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2
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Hs.5324
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502.01
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GAGGTTTTTCCAATAAAGGGAAG
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CATTGGCAAGTGGTTTGTGA
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FCA173
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1189.5
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0.27
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see microsatellites
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RH/GL
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see microsatellites
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see microsatellites
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GAD1
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1228.8
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0.28
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M18629
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RH
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2
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GAD1
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567.66
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7784-7852
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2q31
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TGAGTGTGGCTTGGTGATAGA
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GCAGGTTTGCAGCATGTTT
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FCA573
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1245.1
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0.30
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see microsatellites
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RH/GL
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see microsatellites
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see microsatellites
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Fc.101282
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1255.6
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0.28
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AW646858
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EST-TED11
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RH
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2
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Hs.101282
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554.08-556.58
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7700
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GCTTCCAGAGATCAGGAATGAA
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ATTCAGTGCTTGGGCATCTC
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CHRNA1
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1309.3
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0.21
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AZ081266
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RH
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2
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CHRNA1
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2q24-q32
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Lyons et al., 1997
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Lyons et al., 1997
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TTCGTGACTTGAAACCCACA
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CCACTCAAAGCCCCGTAACAT
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PACT
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1324.2
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0.27
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AW646859
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EST-TFG9
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RH
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2
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PACT
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557.27-575.2
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TTGCGCAAAGAAGAGGTTAAG
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GGCAGAGTGTAGCACCCATT
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FCA544
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1356.7
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0.26
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see microsatellites
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RH/GL
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see microsatellites
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see microsatellites
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INPP1
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1380.1
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0.29
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AW646860
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EST-TEC9
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RH
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2
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INPP1
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607.56
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2q32
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GGAGAACGTTGACCATCCAT
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TCCTGAGCCTCCTTATCCAA
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HSPD1
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1388.0
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0.24
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AW646861
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EST-TCD11
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RH
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9
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HSPD1
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314.69
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TGGTGATGGCAAGCACTAAA
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GAAGAAAAGGCTGGCTGATG
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CDC20
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1414.0
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0.26
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AW646862
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EST-TAD10
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RH
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9
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CDC20
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280.45-.55
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9q13-q21
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TGATGAGTTGGTCCTCAACG
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ATCAGCAGCAGCAGATGAGA
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CD28
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144.9
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0.23
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U57754
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RH
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2
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CD28
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633.08
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2q33
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GCAATGGGACCATTATCCAC
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AAGCACCAAGAGCCACTGTT
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FCA243
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1468.1
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0.24
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see microsatellites
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RH/GL
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see microsatellites
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see microsatellites
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FN1
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1485.4
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0.22
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AW646863
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EST-TAA7
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RH
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2
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FN1
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660.88
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9354
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2q34
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GGGCTTGTCTCCATCAGACT
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GGTCTTCCAGCTGCTGACAT
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