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A3
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First
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Round
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Second
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Round
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Fca RH Locus
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Map Pos.
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R.F.
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GB Acc. Number
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LGD clone #
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Mapping Method
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Hsa Chrom.
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Hsa Homolog
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GB4-RH
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G3-RH Locus
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HsaCytogen.
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Forward Primer
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Reverse Primer
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Forward Primer
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Reverse Primer
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FCA688
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0.00
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0.27
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see microsatellites
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RH/GL/SCH
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see microsatellites
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see microsatellites
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FCA102
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30.8
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0.35
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see microsatellites
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RH/GL/SCH
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see microsatellites
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see microsatellites
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STK15
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42.7
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0.35
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AW646786
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EST-TCA10
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RH
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20
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STK15
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335.44
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20q13.2-.3
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GAAGGCAGATGCACACGTAG
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AGGGCACTGCAGACAAGG
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GNAS1
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62.5
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0.37
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AW646739
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EST-HAG12
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RH
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20
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GNAS1
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336.89
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20q13.2-.3
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GTAGGCCGCCTTAAGCTTTC
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TAAGTCAAGCCTTGAGCACAA
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TCFL5
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88.6
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0.36
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AW646787
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EST-TBB1
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RH
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20
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TCFL5
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(323.01-339.81)
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2846
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GGAGGGAGAAACAAAAGAGTGA
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TGCTTTTTACTTCCTTTATCTGCAT
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YWHAB
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117.5
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0.38
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AW646788
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EST-TBD6/
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RH
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20
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YWHAB
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248.22-250.57
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2293
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20q13.1
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TCCATGCTGCAGGAATATG
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CTGTGTTTGGGCTTTTGATG
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Fc.26213
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143.1
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0.41
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Fc.26213
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EST-TDD7
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RH
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20
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EST-Hs.26213
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237.12-.63
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TAGAACCACGTGCCATTCTG
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ACACTTGGCAGCCCTCCT
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SRC
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185.8
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0.38
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Human EST
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RH/SCH
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20
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SRC
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689.72
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20q11.2(-q13)
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Chen et al., 1999
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Chen et al., 1999
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BC10
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190.0
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0.38
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AW646790
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EST-TCE3
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RH
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20
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BC10
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208.71-210.87
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GAGAGTGAGGGTTGAAGAAA
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AGGGCCTTCACCAAGGCCA
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AHCY
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201.2
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0.32
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AZ081251
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RH
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20
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AHCY
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197.35-.66
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20cen-q13.1
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Lyons et al., 1997
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Lyons et al., 1997
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CACCCTGGATGACCTATGGA
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PRNP
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234.6
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0.31
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AF003087
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RH
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20
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PRNP
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12.17-24.75
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224
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20pter-p12
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AGGCCACTCATTCATTTTGG
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CGCTGCTTGACAGTGATGTT
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CSNK2A1
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272.5
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0.33
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AW646740
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EST-HAE4
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RH
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20
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CSNK2A1
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8.53
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20p13
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AAATCCACAAGCAACGGTTC
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AAATCCACAAGCAACGGTTC
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FCA514
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327.7
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0.42
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see microsatellites
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RH/GL
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see microsatellites
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see microsatellites
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ERF-2
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391.3
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0.46
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AW646791
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EST-TGA5
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RH
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2
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ERF-2 protein
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134.55
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AGTGAACTGATTTCCCCAAAA
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CAGCGGATGAATGAGCAGTA
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FCA498
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440.1
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0.34
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see microsatellites
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RH/GL/SCH
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see microsatellites
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see microsatellites
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FCA208
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499.4
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0.33
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see microsatellites
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RH/GL
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see microsatellites
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see microsatellites
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CCT4
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536.6
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0.37
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AW646792
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EST-TEC5
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RH
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2
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CCT4
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189.98-194.56
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2461
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CCATCCGTCCTCCCCAAG
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GTTCTCCGGCATGGCAAG
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FCA536
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552.5
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0.39
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see microsatellites
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RH/GL
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see microsatellites
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see microsatellites
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PCBP1
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603.4
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0.44
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AW646793
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EST-TSE10
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RH
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2
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PCBP1
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224.21
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2976*
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2p12-p13
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CATTCCACTCTTACATTTCTTATCG
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GCTGTTAATGCTGGGATCCAT
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Fc.23490
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635.7
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0.35
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AW646794
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EST-TCB6
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RH
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EST-Hs.23490
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GGCATTATCAGAATATGAGGAGAAA
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ACAATGCTGAAGGAGCGACT
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FCA161
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661.4
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0.25
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see microsatellites
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RH/GL
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see microsatellites
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see microsatellites
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FCA493
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718.2
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0.20
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see microsatellites
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RH/GL/SCH
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see microsatellites
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see microsatellites
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PPP1CB
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756.9
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0.20
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AW646795
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TED6
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RH
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2
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PPP1CB
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99.65
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2p23
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CGGGTGCATTTGAAAGAACT
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TGTGCTACCATTGATGTGAAA
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IL1B
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787.4
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0.32
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M92060
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RH
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2
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IL1B
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411.22-.89
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5676
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2q14
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ATCTGTGACACGTGGGATGA
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TATGAGCCAGACAGCACCAG
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SLC20A1
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816.8
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0.29
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AF074085
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RH
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2
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SLC20A1
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407.81
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5667-5671
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2q11-q14
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CCATTTCTGGCGTTATCAGTG
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TCAAACAGCTTCACGCTCAG
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IGKC
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827.4
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0.29
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AF198257
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RH/SCH
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2
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IGKC
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309.9-319.5
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2p12
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GTCCAGGACGGAGTACCAAA
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CTGACACTCGCTCCTGTTGA
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CD8A
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837.8
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0.32
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D16536
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RH/SCH
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2
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CD8A
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2p12
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GAGATACGTCTAACATGGAGATGG
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TCCTCATAAAGAGAGTTTTATTTGGTC
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IL1A
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856.3
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0.35
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AF047012
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RH/SCH
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2
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IL1A
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409.77
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5621
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2q14
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AAGACACCCCAGCTTACCCT
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TCCAGGTCATCAGCAGTGAG
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Fc.99841
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880.5
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0.36
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AW646796
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EST-TAB8
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RH
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EST-Hs.99841
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CTGCTGTGTTTATTAAAAGGAATCA
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TGCCAATAAAACCATCACTCA
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FCA181
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949.2
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0.26
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see microsatellites
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RH/GL/SCH
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see microsatellites
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see microsatellites
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Fc.12842
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969.3
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0.25
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AW646797
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EST-TCE4
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RH
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2
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EST-Hs.12842
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56.46
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TTGACAAATCCCCTGGAAAG
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TGGCTTTTTCCCTTCCTCTT
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MYCN
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969.3-1000.5
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0.17
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U82198
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RH/SCH
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Lyons et al., 1997
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Lyons et al., 1997
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AGGAGCTGGGGTTGCAAACT
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Fc.74405
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1000.5
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0.24
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AW646798
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EST-TBA2/TCF9
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RH
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2
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Hs.74405
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TGGGAAAACTCCATTCCTTG
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TGACGTTCGTATGAAATGAAGC
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ODC1
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1012.1
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0.20
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AZ081252
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RH
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2
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ODC1
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39.71-44.26
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2p25
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Lyons et al., 1997
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Lyons et al., 1997
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CTGAGTTTGACAACCTGCAG
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FCA334
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1033.9
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0.17
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see microsatellites
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RH/GL/SCH
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see microsatellites
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see microsatellites
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THRA1*
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SCH*
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17
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THRA1
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309.38
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1997-2014
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17q11.2
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ITPA
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SCH
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20
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ITPA
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20p
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ADA
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SCH
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20
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ADA
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242.62
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20q12-13.11
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ACP1
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SCH
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2
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ACP1
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18.95
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2p25
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MDH1
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SCH
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2
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MDH1
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194.1
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2508
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2p16
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REL
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SCH
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2
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REL
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193.94*
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4454*
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2p13-p12
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* Indicates that the somatic cell
hybrid based physical assignment is not consistent with Zoo-FISH and
RH-based cat-human syntenies
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